PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang0349s00210.1

Common Name

LR48_Vigan01g114200

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

VOZ

Protein Properties

Length: 523aa MW: 57803.8 Da PI: 5.6226

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang0349s00210.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	446.5	3.1e-137	246	462	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 pppsaflgpkcalwdc+rpaqg +w+qdycssfha+lalneg+pg++pvlrp+gi+lkd+llfaalsak+qgk+vgipecegaatakspwna+ Vang0349s00210.1 246 PPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAP 338 89***************************************************************************************** PP VOZ 94 elfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrle 186 elfdls+legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyei+++da+alyrle Vang0349s00210.1 339 ELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLE 431 ***************************************************************************************** PP VOZ 187 lklvdekksakgkvskdsladlqkklgrlta 217 lklvd+kk++k+k+++ds+adlqk++grl+a Vang0349s00210.1 432 LKLVDGKKNSKTKLASDSVADLQKQMGRLSA 462 ***************************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence Send to blast
LAMKKVPKNS CKSASHRLFK DKAKNRVDDL QVMFLDLQFA RKESRTVDAA VLEEQVHQML 60 REWKAELNEP SPASSLQQGG SLGSFSTDIC RLLQLCDEED DASSPLAAPK PEPNDQTLQA 120 RGKVGFQEMD QLNTANLQSG LGGPEGYYSD RDPLVVGFDL STVARMMGLG EGQQQHDFPL 180 IDECKNSTSS VQNAAANNPD GHALEYHQFD LHQDYDHGFY TGFNGTGYCE EDAIPHISSY 240 LPSICPPPSA FLGPKCALWD CPRPAQGLDW CQDYCSSFHA ALALNEGPPG MAPVLRPGGI 300 GLKDNLLFAA LSAKAQGKDV GIPECEGAAT AKSPWNAPEL FDLSVLEGET IREWLFFDKP 360 RRAFESGNRK QRSLPDYSGR GWHESRKQVM NEFGGLKRSY YMDPQPLNHF EWHLYEYEIS 420 KCDACALYRL ELKLVDGKKN SKTKLASDSV ADLQKQMGRL SAEFPHDNKR AAKGRTKVNS 480 KVGIGGVYSA SHRVTTLNGA YEYGLAAPYD YLVENMGDYY GT*

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence Send to blast

LAMKKVPKNS CKSASHRLFK DKAKNRVDDL QVMFLDLQFA RKESRTVDAA VLEEQVHQML  60
REWKAELNEP SPASSLQQGG SLGSFSTDIC RLLQLCDEED DASSPLAAPK PEPNDQTLQA  120
RGKVGFQEMD QLNTANLQSG LGGPEGYYSD RDPLVVGFDL STVARMMGLG EGQQQHDFPL  180
IDECKNSTSS VQNAAANNPD GHALEYHQFD LHQDYDHGFY TGFNGTGYCE EDAIPHISSY  240
LPSICPPPSA FLGPKCALWD CPRPAQGLDW CQDYCSSFHA ALALNEGPPG MAPVLRPGGI  300
GLKDNLLFAA LSAKAQGKDV GIPECEGAAT AKSPWNAPEL FDLSVLEGET IREWLFFDKP  360
RRAFESGNRK QRSLPDYSGR GWHESRKQVM NEFGGLKRSY YMDPQPLNHF EWHLYEYEIS  420
KCDACALYRL ELKLVDGKKN SKTKLASDSV ADLQKQMGRL SAEFPHDNKR AAKGRTKVNS  480
KVGIGGVYSA SHRVTTLNGA YEYGLAAPYD YLVENMGDYY GT*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015034	0.0	AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_014509818.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A0L9TMC5	0.0	A0A0L9TMC5_PHAAN; Uncharacterized protein
STRING	GLYMA07G32374.1	0.0	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Yang K, et al. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8 [PMID:26460024]